Scientific Computing Training Series: Computational Methods for Spatial Transcriptomics

A four-lecture series delivered over 2 weeks online by Dr. Luigi Marchionni, Weill Cornell Medicine. This course provides a practical and methodological introduction to analyzing spatial transcriptomics data, with an emphasis on Visium HD, Xenium workflow. Participants will learn quality control, normalization, deconvolution using single-cell references, visualization, spatial modeling, neighborhood analyses, and integration of single-cell and spatial datasets. Prerequisites: Basic data manipulation with R; familiarity with single-cell RNA-seq. Date/times: Nov 10, 9am-12pm ET; Nov 11, 9am-12pm ET, Nov 17, 9am-12pm ET, Nov 18, 9am-12pm ET. To register, email Dr. Luigi Marchionni at [email protected]